Renamed the uikit lib folders. Resolved the gh-188 by updateing the note. Resolved gh-92 by implementation of the library manager in the compiler.

media/uikit-v2/js/core/alert.js

@@ -0,0 +1,66 @@
+/*! UIkit 2.27.4 | http://www.getuikit.com | (c) 2014 YOOtheme | MIT License */
+(function(UI) {
+
+    "use strict";
+
+    UI.component('alert', {
+
+        defaults: {
+            fade: true,
+            duration: 200,
+            trigger: '.uk-alert-close'
+        },
+
+        boot: function() {
+
+            // init code
+            UI.$html.on('click.alert.uikit', '[data-uk-alert]', function(e) {
+
+                var ele = UI.$(this);
+
+                if (!ele.data('alert')) {
+
+                    var alert = UI.alert(ele, UI.Utils.options(ele.attr('data-uk-alert')));
+
+                    if (UI.$(e.target).is(alert.options.trigger)) {
+                        e.preventDefault();
+                        alert.close();
+                    }
+                }
+            });
+        },
+
+        init: function() {
+
+            var $this = this;
+
+            this.on('click', this.options.trigger, function(e) {
+                e.preventDefault();
+                $this.close();
+            });
+        },
+
+        close: function() {
+
+            var element       = this.trigger('close.uk.alert'),
+                removeElement = function () {
+                    this.trigger('closed.uk.alert').remove();
+                }.bind(this);
+
+            if (this.options.fade) {
+                element.css('overflow', 'hidden').css("max-height", element.height()).animate({
+                    height         : 0,
+                    opacity        : 0,
+                    paddingTop    : 0,
+                    paddingBottom : 0,
+                    marginTop     : 0,
+                    marginBottom  : 0
+                }, this.options.duration, removeElement);
+            } else {
+                removeElement();
+            }
+        }
+
+    });
+
+})(UIkit2);