Commit Graph

25 Commits

Author SHA1 Message Date
Jakob Borg
1eea076f5c cmd/stindex: Detect and open Badger databases 2020-05-30 09:47:11 +02:00
Jakob Borg
8fc2dfad0c
lib/db: Deduplicate block lists in database (fixes #5898) (#6283)
* lib/db: Deduplicate block lists in database (fixes #5898)

This moves the block list in the database out from being just a field on
the FileInfo to being an object of its own. When putting a FileInfo we
marshal the block list separately and store it keyed by the sha256 of
the marshalled block list. When getting, if we are not doing a
"truncated" get, we do an extra read and unmarshal for the block list.

Old block lists are cleared out by a periodic GC sweep. The alternative
would be to use refcounting, but:

- There is a larger risk of getting that wrong and either dropping a
  block list in error or keeping them around forever.

- It's tricky with our current database, as we don't have dirty reads.
  This means that if we update two FileInfos with identical block lists in
  the same transaction we can't just do read/modify/write for the ref
  counters as we wouldn't see our own first update. See above about
  tracking this and risks about getting it wrong.

GC uses a bloom filter for keys to avoid heavy RAM usage. GC can't run
concurrently with FileInfo updates so there is a new lock around those
operation at the lowlevel.

The end result is a much more compact database, especially for setups
with many peers where files get duplicated many times.

This is per-key-class stats for a large database I'm currently working
with, under the current schema:

```
 0x00:  9138161 items, 870876 KB keys + 7397482 KB data, 95 B +  809 B avg, 1637651 B max
 0x01:   185656 items,  10388 KB keys + 1790909 KB data, 55 B + 9646 B avg,  924525 B max
 0x02:   916890 items,  84795 KB keys +    3667 KB data, 92 B +    4 B avg,     192 B max
 0x03:      384 items,     27 KB keys +       5 KB data, 72 B +   15 B avg,      87 B max
 0x04:     1109 items,     17 KB keys +      17 KB data, 15 B +   15 B avg,      69 B max
 0x06:      383 items,      3 KB keys +       0 KB data,  9 B +    2 B avg,      18 B max
 0x07:      510 items,      4 KB keys +      12 KB data,  9 B +   24 B avg,      41 B max
 0x08:     1349 items,     12 KB keys +      10 KB data,  9 B +    8 B avg,      17 B max
 0x09:      194 items,      0 KB keys +     123 KB data,  5 B +  634 B avg,   11484 B max
 0x0a:        3 items,      0 KB keys +       0 KB data, 14 B +    7 B avg,      30 B max
 0x0b:   181836 items,   2363 KB keys +   10694 KB data, 13 B +   58 B avg,     173 B max
 Total 10426475 items, 968490 KB keys + 9202925 KB data.
```

Note 7.4 GB of data in class 00, total size 9.2 GB. After running the
migration we get this instead:

```
 0x00:  9138161 items, 870876 KB keys + 2611392 KB data, 95 B +  285 B avg,    4788 B max
 0x01:   185656 items,  10388 KB keys + 1790909 KB data, 55 B + 9646 B avg,  924525 B max
 0x02:   916890 items,  84795 KB keys +    3667 KB data, 92 B +    4 B avg,     192 B max
 0x03:      384 items,     27 KB keys +       5 KB data, 72 B +   15 B avg,      87 B max
 0x04:     1109 items,     17 KB keys +      17 KB data, 15 B +   15 B avg,      69 B max
 0x06:      383 items,      3 KB keys +       0 KB data,  9 B +    2 B avg,      18 B max
 0x07:      510 items,      4 KB keys +      12 KB data,  9 B +   24 B avg,      41 B max
 0x09:      194 items,      0 KB keys +     123 KB data,  5 B +  634 B avg,   11484 B max
 0x0a:        3 items,      0 KB keys +       0 KB data, 14 B +   17 B avg,      51 B max
 0x0b:   181836 items,   2363 KB keys +   10694 KB data, 13 B +   58 B avg,     173 B max
 0x0d:    44282 items,   1461 KB keys +   61081 KB data, 33 B + 1379 B avg, 1637399 B max
 Total 10469408 items, 969939 KB keys + 4477905 KB data.
```

Class 00 is now down to 2.6 GB, with just 61 MB added in class 0d.

There will be some additional reads in some cases which theoretically
hurts performance, but this will be more than compensated for by smaller
writes and better compaction.

On my own home setup which just has three devices and a handful of
folders the difference is smaller in absolute numbers of course, but
still less than half the old size:

```
 0x00:  297122 items,  20894 KB keys + 306860 KB data, 70 B + 1032 B avg, 103237 B max
 0x01:  115299 items,   7738 KB keys +  17542 KB data, 67 B +  152 B avg,    419 B max
 0x02: 1430537 items, 121223 KB keys +   5722 KB data, 84 B +    4 B avg,    253 B max
 ...
 Total 1947412 items, 151268 KB keys + 337485 KB data.
```

to:

```
 0x00:  297122 items,  20894 KB keys +  37038 KB data, 70 B +  124 B avg,    520 B max
 0x01:  115299 items,   7738 KB keys +  17542 KB data, 67 B +  152 B avg,    419 B max
 0x02: 1430537 items, 121223 KB keys +   5722 KB data, 84 B +    4 B avg,    253 B max
 ...
 0x0d:   18041 items,    595 KB keys +  71964 KB data, 33 B + 3988 B avg, 101109 B max
 Total 1965447 items, 151863 KB keys + 139628 KB data.
```

* wip

* wip

* wip

* wip
2020-01-24 08:35:44 +01:00
Jakob Borg
c71116ee94
Implement database abstraction, error checking (ref #5907) (#6107)
This PR does two things, because one lead to the other:

- Move the leveldb specific stuff into a small "backend" package that
defines a backend interface and the leveldb implementation. This allows,
potentially, in the future, switching the db implementation so another
KV store should we wish to do so.

- Add proper error handling all along the way. The db and backend
packages are now errcheck clean. However, I drew the line at modifying
the FileSet API in order to keep this manageable and not continue
refactoring all of the rest of Syncthing. As such, the FileSet methods
still panic on database errors, except for the "database is closed"
error which is instead handled by silently returning as quickly as
possible, with the assumption that we're anyway "on the way out".
2019-11-29 09:11:52 +01:00
Jakob Borg
7b0c49a1b6 cmd/stindex: Add index checking mode ("idxck") (#5262) 2018-10-11 20:48:39 +01:00
Jakob Borg
f7fc0c1d3e all: Update license url to https (ref #3976) 2017-02-09 08:04:16 +01:00
Jakob Borg
fa0101bd60 lib/protocol, lib/discover, lib/db: Use protocol buffer serialization (fixes #3080)
This changes the BEP protocol to use protocol buffer serialization
instead of XDR, and therefore also the database format. The local
discovery protocol is also updated to be protocol buffer format.

GitHub-Pull-Request: https://github.com/syncthing/syncthing/pull/3276
LGTM: AudriusButkevicius
2016-07-04 10:40:29 +00:00
Audrius Butkevicius
7b5ab29a6d Because I am a muppet 2015-10-23 20:21:21 +01:00
Audrius Butkevicius
4fd614be09 Add a different mode to stindex 2015-10-23 20:02:38 +01:00
Jakob Borg
4581c57478 Fix import paths 2015-09-22 19:38:46 +02:00
Jakob Borg
7705a6c1f1 mv internal lib 2015-08-09 09:35:26 +02:00
Jakob Borg
d898277f62 stindex: add some missing newlines 2015-05-12 11:47:30 +02:00
Jakob Borg
31797a5831 Simplify stindex 2015-05-07 09:59:04 +02:00
Jakob Borg
32425c5561 MPLv2 2015-03-17 16:02:27 +01:00
Jakob Borg
eef1aebe8c Refactor out protocol and luhn (protocol dependency) packages 2015-01-13 13:22:56 +01:00
Jakob Borg
e6c9baf6ef Rename db.Set to db.FileSet 2015-01-12 20:57:39 +01:00
Jakob Borg
8d6db7be31 Rename package internal/files to internal/db 2015-01-12 20:57:22 +01:00
Jakob Borg
4c4143d9be Move FileInfoTruncated to files package
This is where it's used, and it clarifies that it's never used over the
wire.
2015-01-09 08:28:24 +01:00
Jakob Borg
8bc7d259f4 Move FileIntf to files package, expose Iterator type
This is where FileIntf is used, so it should be defined here (it's not
a protocol thing, really).
2015-01-09 08:18:42 +01:00
Jakob Borg
82c6caef85 Use more inclusive copyright header 2014-11-17 12:54:42 +01:00
Jakob Borg
9edce23e76 Relicense to GPL 2014-10-01 07:53:59 +02:00
Audrius Butkevicius
6c352dca74 Rename Repository -> Folder, Node -> Device (fixes #739) 2014-09-28 14:23:07 +01:00
Jakob Borg
14817e31f6 Move top level packages to internal. 2014-09-27 09:42:10 +02:00
Jakob Borg
92eed3b33b Don't load block lists from db unless necessary 2014-08-12 15:04:32 +02:00
Jakob Borg
cec3bad373 Move calmh/syncthing -> syncthing/syncthing 2014-08-01 16:48:46 +02:00
Jakob Borg
c5c9ee92ac Rename pidx utility to stindex 2014-07-31 12:30:53 +02:00